>> (How does one draw a "scientific method"?)

The Scientist is on top?

>> In regards to new "non-atom" logos, 

A periodic table of elements is rather distinct.  Copy-Lefted PToEs can
be found.
Just the colors and boxes, no numbers, would suffice.

http://www.corrosionsource.com/handbook/periodic/periodic_table.gif
http://www.infovis.net/imagenes/T1_N188_A1204_Tabla_en.gif

My favorite
http://www.wikidoc.org/index.php/Image:800px-PTable.png

I don't know the copyright, copyleft, public domain, or
"owner-willingness-to-donate use of the image to the SL project" status
of the above images.
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