On Wed, 20 Jun 2012 10:23:40 -0400
Chris Schanzle <[log in to unmask]> wrote:
> On 06/20/2012 10:19 AM, Chris Schanzle wrote:
> > On 06/20/2012 10:09 AM, Andras Horvath wrote:
> >> On Wed, 20 Jun 2012 10:04:03 -0400
> >> Chris Schanzle<[log in to unmask]> wrote:
> >>
> >>> On 06/20/2012 09:55 AM, Andras Horvath wrote:
> >>>> On Wed, 20 Jun 2012 09:49:04 -0400
> >>>> Chris Schanzle<[log in to unmask]> wrote:
> >>>>
> >>>>> On 06/20/2012 07:30 AM, Andras Horvath wrote:
> >>>>>> On Wed, 20 Jun 2012 15:26:16 +0400
> >>>>>> Oleg Sadov<[log in to unmask]> wrote:
> >>>>>>
> >>>>>>> 20/06/2012 08:35 +0200, Andras Horvath wrote:
> >>>>>>>> On Tue, 19 Jun 2012 19:05:49 +0200
> >>>>>>>> Andras Horvath<[log in to unmask]> wrote:
> >>>>>>>>
> >>>>>>>>> On Tue, 19 Jun 2012 09:59:26 -0700
> >>>>>>>>> Akemi Yagi<[log in to unmask]> wrote:
> >>>>>>>>>
> >>>>>>>>>> On Tue, Jun 19, 2012 at 9:55 AM, Andras
> >>>>>>>>>> Horvath<[log in to unmask]> wrote:
> >>>>>>>>>>
> >>>>>>>>>>> How could I run a self check on all packages with rpm to
> >>>>>>>>>>> see if all the files are there and their hashes match too?
> >>>>>>>>>>
> >>>>>>>>>> Run 'rpm -V' against the packages.
> >>>>>>>>>>
> >>>>>>>>>> If you get any output, then there is (are) some
> >>>>>>>>>> mismatch(es). Man page has the explanation for the output.
> >>>>>>>>>>
> >>>>>>>>>> Akemi
> >>>>>>>>>
> >>>>>>>>> I ran it against python and yum packages, but all are ok.
> >>>>>>>>>
> >>>>>>>>> Andras
> >>>>>>>>
> >>>>>>>> If I restore "/usr/lib64/python2.6" directory from my backup,
> >>>>>>>> then yum works again just fine. I can run "yum update" too.
> >>>>>>>> But when I run "yum reinstall python", then after the package
> >>>>>>>> install everything goes wrong again.
> >>>>>>>>
> >>>>>>>> Any idea what could cause this? This is a simple case
> >>>>>>>> installing a package.
> >>>>>>>
> >>>>>>> Required cElementTree module is actually located in xml.etree
> >>>>>>> (/usr/lib64/python2.6/xml/etree/cElementTree.py from python
> >>>>>>> rpm), standalone cElementTree is not included in distro. Try
> >>>>>>> to check access to the module at python interactive session:
> >>>>>>>
> >>>>>>> from xml.etree import cElementTree
> >>>>>>>
> >>>>>>>> Andras
> >>>>>>
> >>>>>> $ python
> >>>>>> Python 2.6.6 (r266:84292, Jun 18 2012, 09:57:52)
> >>>>>> [GCC 4.4.6 20110731 (Red Hat 4.4.6-3)] on linux2
> >>>>>> Type "help", "copyright", "credits" or "license" for more
> >>>>>> information.
> >>>>>>>>> from xml.etree import cElementTree
> >>>>>> Traceback (most recent call last):
> >>>>>> File "<stdin>", line 1, in<module>
> >>>>>> File "/usr/lib64/python2.6/xml/etree/cElementTree.py",
> >>>>>> line 3, in<module> from _elementtree import *
> >>>>>> ImportError: /usr/lib64/python2.6/lib-dynload/pyexpat.so:
> >>>>>> symbol XML_SetHashSalt, version EXPAT_2_0_1_RH not defined in
> >>>>>> file libexpat.so.1 with link time reference
> >>>>>>>>>
> >>>>>>
> >>>>>>
> >>>>>> Andras
> >>>>>
> >>>>> What does this output?
> >>>>>
> >>>>> rpm -q expat
> >>>>>
> >>>>> Do you have a yum update pending for it?
> >>>>>
> >>>>> rpm -q --changelog expat | head
> >>>>> * Fri Apr 27 2012 Joe Orton<[log in to unmask]> - 2.0.1-11
> >>>>> - use symbol version for XML_SetHashSalt (CVE-2012-0876,
> >>>>> #816306)
> >>>>
> >>>> Thanks for you help. The output of "rpm -q expat" is:
> >>>>
> >>>> expat-2.0.1-11.el6_2.x86_64
> >>>>
> >>>> I'm supposed to have all the updates installed to date.
> >>>>
> >>>> Andras
> >>>
> >>> Hmm. Well, on a fully updated CentOS 6 system (sorry, I switched
> >>> back), I have:
> >>>
> >>> rpm -q expat
> >>> expat-2.0.1-11.el6_2.x86_64
> >>> expat-2.0.1-11.el6_2.i686
> >>>
> >>>
> >>> python
> >>> Python 2.6.6 (r266:84292, Dec 7 2011, 20:48:22)
> >>> [GCC 4.4.6 20110731 (Red Hat 4.4.6-3)] on linux2
> >>> Type "help", "copyright", "credits" or "license" for more
> >>> information.
> >>>>>> from xml.etree import cElementTree
> >>>>>> ^D
> >>>
> >>>
> >>> Could this be an issue with prelink? Try unprelinking the world.
> >>
> >> # prelink -au
> >> prelink: /usr/lib64/xulrunner-2/libxul.so: DT_JMPREL tag not
> >> adjacent to DT_RELA relocations
> >> prelink: /usr/lib64/sunbird-1.0b2pre/xpcshell: Could not find one
> >> of the dependencies
> >> prelink: /usr/lib64/sunbird-1.0b2pre/sunbird-bin: Could not find
> >> one of the dependencies
> >> prelink: /usr/lib64/xulrunner-2/libmozsqlite3.so: DT_JMPREL tag
> >> not adjacent to DT_RELA relocations
> >>
> >> Unfortunately problem still persists.
> >>
> >> Andras
> >
> >
> > Running low on ideas...
> >
> > Assuming your locate db is up to date (if not,
> > run /etc/cron.daily/mlocate.cron ), compare your results of:
> >
> > locate libexpat.so
> >
> > I have several others, but my LD_LIBRARY_PATH is empty:
> >
> > locate libexpat.so
> > /lib/libexpat.so.1
> > /lib/libexpat.so.1.5.2
> > /lib64/libexpat.so.1
> > /lib64/libexpat.so.1.5.2
> > /local/opt/matlab-2012a/bin/glnxa64/libexpat.so.1
> > /local/opt/matlab-2012a/bin/glnxa64/libexpat.so.1.5.0
> > /usr/lib/vmware/lib/libexpat.so.0
> > /usr/lib/vmware/lib/libexpat.so.0/libexpat.so.0
> > /usr/lib/vmware/ovftool/libexpat.so.0
> > /usr/lib/vmware-installer/1.1/lib/lib/libexpat.so.0
> > /usr/lib/vmware-installer/1.1/lib/lib/libexpat.so.0/libexpat.so.0
> > /usr/lib64/libexpat.so
> > /usr/lib64/libexpat.so.0
> > /usr/lib64/libexpat.so.0.5.0
> >
> >
> > env | grep LD
>
> One final check:
>
> strace -e file python -c 'from xml.etree import cElementTree' 2>&1 |
> grep libexpat.so open("/lib64/libexpat.so.1", O_RDONLY) = 5
locate libexpat.so
/lib/libexpat.so.1
/lib/libexpat.so.1.5.2
/lib64/libexpat.so.1
/lib64/libexpat.so.1.5.2
/usr/lib64/libexpat.so
As I see I'm missing these compared to you:
/usr/lib64/libexpat.so.0
/usr/lib64/libexpat.so.0.5.0
I'll try to reinstall it then.
To the other:
$ strace -e file python -c 'from xml.etree import cElementTree' 2>&1 | grep libexpat.so
open("/lib/libexpat.so.1", O_RDONLY) = 5
ImportError: /usr/lib64/python2.6/lib-dynload/pyexpat.so: symbol
XML_SetHashSalt, version EXPAT_2_0_1_RH not defined in file
libexpat.so.1 with link time reference
This seems to be the cause of all this I guess. Any other idea on how
to resolve this specific one? :)
Thanks for you time!
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